PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004486946.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 416aa    MW: 46660.2 Da    PI: 5.8643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004486946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.2e-12350395655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR +i +++ +L++l+P+      k  + a++L +Av+YIk+Lq
  XP_004486946.1 350 SIAERVRRTKISERMRKLQDLVPNM----EKQTNTADMLDLAVDYIKDLQ 395
                     689*********************7....467*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.205344394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.19E-16347407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-12348399No hitNo description
Gene3DG3DSA:4.10.280.101.6E-15349405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-14350400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-9350395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MDSSDLQQQQ VNSSSGLTRY RSAPSSYFNN IIDREFYEHV FNRPSSPETE RVFSRFMNSL  60
GSEEDLLAQK ISVDSTVKEE EEQQQQVVQQ QSNININNIN INDDDNNSNN YNNSAATTSH  120
GFYQSSVMPP LPNQNLSSGM EGNYSMGVNR LQQMKSHGGN NSNLIRHSSS PAGLFSQINI  180
ENGYVIMRDM GNLGAVNNSV KEAKFSTTRS LKNSSNYSSR PMSSIAEIGD KGNRENNQEN  240
DVFGENRGND YISEYQVDTW DDTEMMSENV GGLKRFRDND SKQQFSGLNA SSSVQNETGG  300
GHSSSSPLAH QLSMPNTLSE MAAMEKFLHF SDSVPMKIRA KRGCATHPRS IAERVRRTKI  360
SERMRKLQDL VPNMEKQTNT ADMLDLAVDY IKDLQNQVQT LSDCRAKCTC SHKQQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486946.10.0PREDICTED: transcription factor bHLH130-like isoform X1
TrEMBLG7IUE70.0G7IUE7_MEDTR; Transcription factor bHLH122-like protein
STRINGGLYMA15G03740.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.15e-67bHLH family protein